Salpingoeca rosetta str. ATCC 50818 (GCA_000188695.1) (Proterospongia_sp_ATCC50818)

About Salpingoeca rosetta str. ATCC 50818

Wikipedia

Salpingoeca rosetta is a species of Similar low level Unlike S. rosetta, sponges also have other cell-types that can perform different functions. Also, the collar cells of sponges beat within canals in the sponge body, whereas Salpingoeca rosetta’s collar cells reside on the inside and it lacks internal canals. Despite these minor differences, there is strong evidence that Proterospongia and Metazoa are highly related.

Its genome has been studied as a model for Premetazoan evolution. The genome is 55 megabases in size. Homologs of cell adhesion, neuropeptide and glycosphingolipid metabolism genes are present in the genome.

(Text and image from Wikipedia, the free encyclopaedia.)

Taxonomy ID 946362

Data source Broad Institute

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

About this species