Phytophthora infestans (ASM14294v1)

About Phytophthora infestans T30-4

Phytophthora infestans is an oomycete or water mold, a fungus-like microorganism that causes the serious potato and tomato disease known as late blight or potato blight. Early blight, caused by Alternaria solani, is also often called "potato blight". Late blight was a major culprit in the 1840s European, the 1845–1852 Irish, and the 1846 Highland potato famines. The organism can also infect some other members of the Solanaceae.[1][2][3] The pathogen is favored by moist, cool environments: sporulation is optimal at 12–18 °C (54–64 °F) in water-saturated or nearly saturated environments, and zoospore production is favored at temperatures below 15 °C (59 °F). Lesion growth rates are typically optimal at a slightly warmer temperature range of 20 to 24 °C (68 to 75 °F).

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Taxonomy ID 403677

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Taxonomy ID 403677

Data source Broad Institute

More information and statistics

Genome assembly: ASM14294v1

More information and statistics

Download DNA sequence (FASTA)

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Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

What can I find? Short sequence variants.

More about variation in Ensembl Protists

Download all variants - GVF - VCF - VEP

Variant Effect Predictor

Other Data

The ESTs sequenced from different stages of pathogen infection were also downloaded from dbEST and aligned to the genome using exonerate.