Entamoeba histolytica (JCVI-ESG2-1.0)

About the Entamoeba histolytica genome

Entamoeba histolytica is an anaerobic parasitic protozoan, part of the genus Entamoeba. Predominantly infecting humans and other primates, E. histolytica is estimated to infect about 50 million people worldwide. Entamoeba histolytica (strain HM-1:IMSS), was the first human amoeba to have its genome sequenced, assembled and analyzed. Whole genome shotgun sequencing with small insert libraries was used to carry out sequencing to a 12.5-fold coverage.

Taxonomy ID 294381

Data source AmoebaDB

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Genomic alignments [23] [Show»«Hide
Entamoeba histolytica : Albugo laibachiiTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Bigelowiella natansTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Emiliania huxleyiTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Giardia lambliaTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Guillardia theta CCMP2712TRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Hyaloperonospora arabidopsidisTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Leishmania majorTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Paramecium tetraureliaTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Phaeodactylum tricornutumTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Phytophthora infestansTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Phytophthora kernoviaeTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Phytophthora lateralisTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Phytophthora parasiticaTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Phytophthora ramorumTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Pythium aphanidermatumTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Pythium arrhenomanesTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Pythium irregulareTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Pythium iwayamaiTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Pythium ultimumTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Pythium vexansTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Tetrahymena thermophilaTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Toxoplasma gondiiTRANSLATED_BLAT_NET | stats
Entamoeba histolytica : Trypanosoma bruceiTRANSLATED_BLAT_NET | stats
]

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

About this species