Phytophthora ramorum (ASM14973v1)

About the Phytophtora ramorum genome

Phytophthora ramorum is an oomycete plant pathogen classified in the kingdom Stramenopila. P. ramorum is the causal agent of sudden oak death on oak and over 40 plant genera. It causes stem cankers on trees, and leaf blight on ornamentals and forest shrubs species. It is an emerging plant pathogen first observed in North America but also widespread in Europe.

Taxonomy ID 164328

Data source Joint Genome Institute

More information and statistics

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Genomic alignments [23] [Show»«Hide
Phytophthora ramorum : Albugo laibachiiTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Bigelowiella natansTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Emiliania huxleyiTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Entamoeba histolyticaTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Giardia lambliaTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Guillardia theta CCMP2712TRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Hyaloperonospora arabidopsidisTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Leishmania majorTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Paramecium tetraureliaTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Phaeodactylum tricornutumTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Phytophthora infestansTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Phytophthora kernoviaeTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Phytophthora lateralisTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Phytophthora parasiticaTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Pythium aphanidermatumTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Pythium arrhenomanesTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Pythium irregulareTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Pythium iwayamaiTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Pythium ultimumTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Pythium vexansTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Tetrahymena thermophilaTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Toxoplasma gondiiTRANSLATED_BLAT_NET | stats
Phytophthora ramorum : Trypanosoma bruceiTRANSLATED_BLAT_NET | stats
]

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

About this species