Salpingoeca rosetta str. ATCC 50818 (Proterospongia_sp_ATCC50818)

Salpingoeca rosetta str. ATCC 50818 Assembly and Gene Annotation

About Salpingoeca rosetta str. ATCC 50818

Wikipedia

Salpingoeca rosetta is a species of Similar low level Unlike S. rosetta, sponges also have other cell-types that can perform different functions. Also, the collar cells of sponges beat within canals in the sponge body, whereas Salpingoeca rosetta’s collar cells reside on the inside and it lacks internal canals. Despite these minor differences, there is strong evidence that Proterospongia and Metazoa are highly related.

Its genome has been studied as a model for Premetazoan evolution. The genome is 55 megabases in size. Homologs of cell adhesion, neuropeptide and glycosphingolipid metabolism genes are present in the genome.

(Text and image from Wikipedia, the free encyclopaedia.)

More information

General information about this species can be found in Wikipedia.

Statistics

Summary

AssemblyProterospongia_sp_ATCC50818, INSDC Assembly GCA_000188695.1,
Database version97.1
Base Pairs51,703,572
Golden Path Length55,440,309
Genebuild byENA
Genebuild methodGenerated from ENA annotation
Data sourceBroad Institute

Gene counts

Coding genes11,624
Non coding genes366
Small non coding genes365
Long non coding genes1
Pseudogenes6
Gene transcripts12,103

About this species