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Phytophthora ramorum (ASM14973v1) ▼

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About the Phytophtora ramorum genome

Phytophthora ramorum is an oomycete plant pathogen classified in the kingdom Stramenopila. P. ramorum is the causal agent of sudden oak death on oak and over 40 plant genera. It causes stem cankers on trees, and leaf blight on ornamentals and forest shrubs species. It is an emerging plant pathogen first observed in North America but also widespread in Europe.

Taxonomy ID 164328

Data source Joint Genome Institute

More information and statistics

Example region

Genome assembly: ASM14973v1

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Download DNA sequence (FASTA)

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Example geneExample transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor