Dictyostelium discoideum (dicty_2.7)

About Dictyostelium discoideum AX4

Dictyostelium discoideum is a species of soil-dwelling amoeba belonging to the phylum Amoebozoa, infraphylum Mycetozoa. Commonly referred to as slime mold, D. discoideum is a eukaryote that transitions from a collection of unicellular amoebae into a multicellular slug and then into a fruiting body within its lifetime. Its unique asexual life cycle consists of four stages: vegetative, aggregation, migration, and culmination. The life cycle of D. discoideum is relatively short, which allows for timely viewing of all stages. The cells involved in the life cycle undergo movement, chemical signaling, and development, which are applicable to human cancer research. The simplicity of its life cycle makes D. discoideum a valuable model organism to study genetic, cellular, and biochemical processes in other organisms.

Picture credit via Wikimedia Commons (Image source)

Taxonomy ID 352472

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Taxonomy ID 352472

Data source European Nucleotide Archive

More information and statistics

Genome assembly: dicty_2.7

More information and statistics

Download DNA sequence (FASTA)

Display your data in Ensembl Protists

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

Other data

The ESTs sequenced from different stages of Dictyostelium development were also downloaded from dictyBase and aligned to the genome using exonerate.