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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Protist Compara
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Pan-taxonomic Compara
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Gene: VAR PF3D7_0400400

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Description

Erythrocyte membrane protein 1, PfEMP1 [Source:UniProtKB/TrEMBL;Acc:Q8I218]

Gene Synonyms

VAR-UPSB1

Location

Primary_assembly Pf3D7_04_v3: 45,555-56,860 reverse strand.

About this gene

This gene has 1 transcript (splice variant), 47 orthologues, 64 paralogues and is a member of 1 Ensembl protein family.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	PF3D7_0400400.1	10404	3467aa	PF3D7_0400400.1-p1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0U1XT24 A0A191VZ00 A0A191VZ17 A0A191VZ46 A0A191VZ60 A0A191VZ63 A0A191VZ81 A0A191VZ85 A0A191VZA9 A0A191VZB1 A0A191VZB3 A0A191VZC0 A0A191VZC2 A0A191VZC8 A0A191VZE0 A0A191VZF7 A0A5P1A089 A0A5P1A0M0 A0A5P1A0N9 A0A5P1A0P2 A0A5P1A136 A0A5P1A178 A0A5P1A1M5 A0A5P1A1X5 A0A5P1A235 A0A5P1A2I5 A0A5P1A2J7 A0A5P1A2P8 A0A5P1A346 A0A5P1A352 A3R6S2 A3R6S4 A3R6V1 A3R6V3 I2CIW8 I2CIX5 I2CIX6 I2CIX7 I2CIY0 Q26032 Q6UDW5 Q8I218 Q8T326	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,

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Summary

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