
Plasmodium chabaudi Assembly and Gene Annotation
About Plasmodium chabaudi chabaudi
Plasmodium chabaudi is a parasite of the genus Plasmodium subgenus Vinckeia. As in all Plasmodium species, P. chabaudi has both vertebrate and insect hosts. The vertebrate hosts for this parasite are rodents.
Taxonomy ID 31271
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
P. chabaudi is 18.8 Mb in sizewith a karyotype of 14 chromosomes. The G+C content is approximately 23%.
Annotation
Annotation of the P. chabaudi AS genome is provided by GeneDB where the latest sequence dataand annotation is constantly updated. Periodic releases are also available from PlasmoDB. PlasmoDB.org hosts genomic and proteomic data (and more) for different species of the parasite eukaryote Plasmodium. It brings together data provided by numerous laboratories worldwide.
References
- A comprehensive survey of the Plasmodium life cycle by genomic,
transcriptomic, and proteomic
analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK et al. 2005. Science. 307:82-86.
More information
General information about this species can be found in Wikipedia.
Statistics
Summary
Assembly | PCHAS01, INSDC Assembly GCA_900002335.1, Nov 2015 |
Database version | 115.1 |
Golden Path Length | 18,867,626 |
Genebuild by | |
Genebuild method | Import |
Data source | GeneDB |
Gene counts
Coding genes | 5,157 |
Non coding genes | 132 |
Small non coding genes | 132 |
Pseudogenes | 14 |
Gene transcripts | 5,303 |