Toxoplasma gondii ME49 Assembly and Gene Annotation
About the Toxoplasma gondii genome
Toxoplasma gondii is a parasitic protist, belonging to the phylum Apicomplexa. It is carried by cats and few warm blooded animals including humans. Up to 20 to 30% of the world's population is estimated to be chronically infected with the apicomplexan parasite. It causes the Toxoplasmosis which is usually minor and self-limiting disease but can have serious or even fatal effects during pregnancy or in an immunocompromised human or cat.
Assembly
The T. gondii genome is ~70 Mb in size and consists of 14 chromosomes. The T. gondii genome, like many other apicomplexan parasites possess a nonphotosynthetic plastid, referred to as the apicoplast. The assembly is also available from the EMBL/Genbank/DDBJ databases under the accession GCA_000006565.2
Annotation
Annotation of the T. gondii genome has been derived from ToxoDB (release 36).
References
- ToxoDB: accessing the Toxoplasma gondii
genome.
Kissinger JC, Gajria B, Li L, Paulsen IT, Roos DS. 2003. Nucleic Acids Res.. 31:234-236.
Statistics
Summary
Assembly | TGA4, INSDC Assembly GCA_000006565.2, |
Database version | 113.2 |
Golden Path Length | 65,669,794 |
Genebuild by | toxoDB |
Genebuild method | Import |
Data source | ToxoDB |
Gene counts
Coding genes | 8,322 |
Non coding genes | 598 |
Small non coding genes | 598 |
Gene transcripts | 8,920 |