Pythium iwayamai Assembly and Gene Annotation
Pythium iwayamai have been isolated mainly from monocotyledon plants. It grows well at lower temperatures and is pathogenic on monocot grasses under snow cover. Pythium iwayamai causes snow-rot disease of cereal plants, including wheat and barley.
References
- Pythium Genome Database.
- Genome sequence of the necrotrophic plant pathogen Pythium ultimum
reveals original pathogenicity mechanisms and effector
repertoire.
Lvesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, Huitema E, Raffaele S, Robideau GP, Thines M, Win J et al. 2010. Genome Biol.. 11:R73. - Comparative genomics reveals insight into virulence strategies of
plant pathogenic
oomycetes.
Adhikari BN, Hamilton JP, Zerillo MM, Tisserat N, Lvesque CA, Buell CR. 2013. PLoS ONE. 8:e75072. - Carbohydrate-active enzymes in pythium and their role in plant cell
wall and storage polysaccharide
degradation.
Zerillo MM, Adhikari BN, Hamilton JP, Buell CR, Lvesque CA, Tisserat N. 2013. PLoS ONE. 8:e72572.
Picture credit: Creeping bent grass infected with Pythium iwayamai - Photo taken by Dr. Marcelo Zerillo in the laboratory of Ned Tisserat
Statistics
Summary
Assembly | piw_scaffolds_v1, INSDC Assembly GCA_000387465.2, Aug 2013 |
Database version | 113.2 |
Golden Path Length | 43,199,174 |
Genebuild by | PGD |
Genebuild method | Import |
Data source | Pythium Genome Database |
Gene counts
Coding genes | 15,254 |
Non coding genes | 87 |
Small non coding genes | 86 |
Misc non coding genes | 1 |
Pseudogenes | 9 |
Gene transcripts | 15,351 |