
Plasmodium berghei - GCA_900002375.2 Assembly and Gene Annotation
About Plasmodium berghei
Plasmodium berghei is a single-celled parasite causing rodent malaria. It is in the Plasmodium subgenus Vinckeia.
Picture credit: Creative Commons Attribution-Share Alike 3.0 via Wikimedia Commons (Image source) Taxonomy ID 5823
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
P. berghei has an estimated genome size of 18.5 Mb with a karyotype of 14 chromosomes ranging in size from 0.6 Mb to 3.8 Mb. The G+C content is approximately 22%. The assembly presented has been imported from INSDC.
Annotation
The annotation has been imported from VEuPathDB.
References
- A comprehensive survey of the Plasmodium life cycle by genomic,
transcriptomic, and proteomic
analyses.
Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A, Christophides GK et al. 2005. Science. 307:82-86.
Statistics
Summary
Assembly | GCA900002375v2, INSDC Assembly GCA_900002375.2, |
Database version | 115.2 |
Golden Path Length | 18,780,606 |
Genebuild by | VEuPathDB PlasmoDB |
Genebuild method | Import |
Data source | GeneDB |
Gene counts
Coding genes | 4,945 |
Non coding genes | 177 |
Small non coding genes | 177 |
Pseudogenes | 132 |
Gene transcripts | 5,267 |