Fragilariopsis cylindrus CCMP1102 (GCA_001750085.1) Assembly and Gene Annotation
Fragilariopsis cylindrus is a cold-water diatom found in Arctic and Antarctic sea water and sea ice. It can form large ice-edge blooms and is regularly detected in sea ice investigations. To date, prokaryotes are the only psychrophilic (cold-loving) organisms for which whole genome sequences exist. The whole genome sequencing of F. cylindrus will provide the first insights into a psychrophilic eukaryotic organism with compelling ecological and biotechnological applications.
The gene annotaton was done at the Joint Genome Institute (JGI).
Statistics
Summary
Assembly | Fracy1, INSDC Assembly GCA_001750085.1, |
Database version | 113.1 |
Golden Path Length | 80,540,407 |
Genebuild by | |
Genebuild method | Import |
Data source | JGI-PGF |
Gene counts
Coding genes | 18,082 |
Non coding genes | 448 |
Small non coding genes | 447 |
Long non coding genes | 1 |
Pseudogenes | 5 |
Gene transcripts | 18,564 |