Phytophthora infestans (ASM14294v1)

About the Phytophtora infestans genome

Phytophthora infestans is the causal agent of the late potato blight disease and also infects tomatoes and other members of the Solanaceae. This oomycete caused several major crop losses including the Great Famine in Ireland. This pathogen can affect a large area reproducing asexually through spores. P. infestans sporangia are carried by the wind until they land in plant tissue. If the conditions are wet and cool they release their zoospores that can swim until encysting in the host. If conditions are warmer a germ tube from the sporangium can penetrate the plant.

Taxonomy ID 403677

Data source Broad Institute

More information and statistics

Genome assembly: ASM14294v1

More information and statistics

Download DNA sequence (FASTA)

Display your data in Ensembl Protists

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins - FASTA - GFF3

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Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analyses

Phylogenetic overview of gene families

Download alignments (EMF)

Variation

What can I find? Short sequence variants.

More about variation in Ensembl Protists

Download all variants - GVF - VCF - VEP

Variant Effect Predictor

Other Data

The ESTs sequenced from different stages of pathogen infection were also downloaded from dbEST and aligned to the genome using exonerate.

About this species